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howto:cosmopmc [2013/05/29 11:57]
smabakane
howto:cosmopmc [2015/05/22 10:35] (current)
thlatshwayo
Line 3: Line 3:
 Procedure to run CosmoPmc on Sun cluster: Procedure to run CosmoPmc on Sun cluster:
  
-The CosmoPmc is installed in the following directory: /​opt/​gridware/​applications/​cosmopmc+The CosmoPmc is installed in the following directory: ​''​/​opt/​gridware/​applications/​cosmopmc''​
  
 Access is via modules. Access is via modules.
  
-Firstly, you need to execute ​these command: ​module use /​opt/​gridware/​users/​nag/​modulefiles+Firstly, you need to execute ​this command:
  
-You will then see the below output when you execute this command: ​module ​available+  ​module ​use /​opt/​gridware/​users/​nag/​modulefiles
  
 +You will then see the below output when you execute this command: ''​module available''​
 +
 +<​code>​
 ------------ /​opt/​gridware/​users/​nag/​modulefiles --------------- ------------ /​opt/​gridware/​users/​nag/​modulefiles ---------------
-cosmopmc/​1.11(default) fftw/​2.0.7(default) ​   gcc/​4.7.2(default) ​    ​+cosmopmc/​1.11(default) fftw/​2.0.7(default) ​   gcc/​4.7.2(default)
 mpich2/​1.0.8(default) ​ scalasca/​1.4.2 mpich2/​1.0.8(default) ​ scalasca/​1.4.2
 +</​code>​
  
 +Type this command to see more info about the added module: ''​module help cosmopmc''​
  
-Type this command to see more info about the added module: module help cosmopmc +<​code>​
 ----------- Module Specific Help for '​cosmopmc/​1.11'​ -------------- ----------- Module Specific Help for '​cosmopmc/​1.11'​ --------------
  
 This module enables use of CosmoPMC. This module enables use of CosmoPMC.
-Please read  +Please read /​opt/​gridware/​applications/​cosmopmc/​CHPC/​Readme.txt 
-/​opt/​gridware/​applications/​cosmopmc/​CHPC/​Readme.txt+</​code>​
  
-Type this command to path added in your user environment:​ module show cosmopmc+Type this command to see added path in your user environment: ​''​module show cosmopmc''​
  
 +<​code>​
 /​opt/​gridware/​users/​nag/​modulefiles/​cosmopmc/​1.11:​ /​opt/​gridware/​users/​nag/​modulefiles/​cosmopmc/​1.11:​
  
-prereq ​  ​openmpi-1.6.1-intel  +prereq ​  ​openmpi-1.6.1-intel 
-setenv ​          ​COSMOPMC /​opt/​gridware/​applications/​cosmopmc  +setenv ​          ​COSMOPMC /​opt/​gridware/​applications/​cosmopmc 
-prepend-path ​    PATH /​opt/​gridware/​applications/​cosmopmc/​bin  +prepend-path ​    PATH /​opt/​gridware/​applications/​cosmopmc/​bin 
-prepend-path ​    ​LD_LIBRARY_PATH /​opt/​gridware/​applications/​cosmopmc/​lib ​+prepend-path ​    ​LD_LIBRARY_PATH /​opt/​gridware/​applications/​cosmopmc/​lib 
 +</​code>​
  
-This module enables use of CosmoPMC. You are now ready to run CosmoPmC using Moab Script.+This module enables use of CosmoPmC. You are now ready to run CosmoPmC using PBSpro job script.
  
 [[http://​www2.iap.fr/​users/​kilbinge/​CosmoPMC/​|CosmoPmc main site.]] [[http://​www2.iap.fr/​users/​kilbinge/​CosmoPMC/​|CosmoPmc main site.]]
  
  
/var/www/wiki/data/attic/howto/cosmopmc.1369821479.txt.gz · Last modified: 2013/05/29 11:57 by smabakane