Table of Contents

Dane Kennedy

Who am I

Started work at the CHPC in 2013 as a Bioinformatics Application Scientist.

Current todo list

  1. PBSnodes tracker
    • Cron jobs
      • Run pbsnodes
      • clean git repo
      • generate plots/reports
    • scripts
      • python script to parse data
      • R script to generate report
      • bash script to generate animations
  2. qstat tracker
    • Cron jobs
      • Run qstat
      • clean git repo
      • generate plots/reports
    • scripts
      • python script to parse data
      • R script to generate report
      • bash script to generate animations
  3. PBSPro pipeline monitor
    • Generate dependency tree
    • Rerun failed jobs
      • resubmit failed job
      • update dependencies