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guide:m9000 [2015/02/20 14:41]
sfebruary Added example script
guide:m9000 [2021/12/09 16:42] (current)
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 =====Job submission===== =====Job submission=====
 +[Courtesy of Sean February]
 +
 +The queue name for the M9000 machine is spark. Your job script (see example below) must be located somewhere in ''/scratch/work/yourusername/'' (equivalently ''/export/home/yourusername/m9_scratch/''). Submission should be done normally via the PBS scheduler from the login node:
 +<code>
 +yourusername@login02:~/m9_scratch $ qsub jobscriptname
 +</code>
  
 Example script: Example script:
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 #PBS -l place=free #PBS -l place=free
 #PBS -l walltime=01:00:00 #PBS -l walltime=01:00:00
-#PBS -o /scratch/work/username/stdout +#PBS -o /scratch/work/yourusername/stdout 
-#PBS -e /scratch/work/username/stderr+#PBS -e /scratch/work/yourusername/stderr
 cd $PBS_O_WORKDIR cd $PBS_O_WORKDIR
  
-HOME_DIR=/scratch/work/username/+HOME_DIR=/scratch/work/yourusername/
 LOG_NAME=testjob_log LOG_NAME=testjob_log
 THIS_JOB=$HOME_DIR$LOG_NAME THIS_JOB=$HOME_DIR$LOG_NAME
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 echo "My job ends here" >> $THIS_JOB  echo "My job ends here" >> $THIS_JOB 
 </code> </code>
- 
- 
  
  
/app/dokuwiki/data/attic/guide/m9000.1424436098.txt.gz · Last modified: 2021/12/09 16:42 (external edit)