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howto:dlpoly [2015/12/09 13:15]
kgovender
howto:dlpoly [2024/08/12 13:30] (current)
alopis
Line 1: Line 1:
-Easy DLPOLY_2.PBS creation and submission+====DLPOLY job submission==== 
 +There are different versions of DLPOLY currently installed on our system 
 +These include DLPOLY 1.9 (also known as DLPOLY classic), DLPOLY 4.07 and DLPOLY 4.08. 
 +As such there are different scripts available on the login node for PBS job creation and submission
 +To run any or these scripts execute **qdlpoly_1.9**, **qdlpoly_2.20**, **qdlpoly_3.09**, **qdlpoly_4.07** or **qdlpoly_4.08** in the directory that has your input files for your job. 
 +Please ensure CONFIG, CONTROL and FIELD files are located in submission directory or no PBS will be generated.
  
-Execute qdlpoly_2.2 on login node and follow the prompts. This script handles PBS setup and submissionSets up the mpi environment variables allowing you to run over multiple processors and nodes. +**Note**, please first include this **module load** - even better if your add this line to your .bashrc, then the Easy Scripts should be visible and available: 
 + 
 +  module load chpc/easy_scripts 
 + 
 + 
 +Examples of input required for these scripts are provided below. 
 + 
 +                    EXAMPLE1 
 +  Enter project name/shortname 
 +  CHEM0100 
 +  Enter job name 
 +  test 
 +  Enter number of nodes on which to run job 
 +  1 
 +  Enter total walltime (hour:minute) 
 +  2:00 
 +  Enter email address 
 +  testing@gmail.com 
 +  Generated pbs file for test 
 +  Do you wish to submit job to cluster (y/n) 
 +  y 
 + 
 +   
 +    EXAMPLE2 [PLEASE TAKE NOTE OF EMPTY SPACES] 
 +  Enter project name/shortname 
 +  CHEM0100 
 +  Enter job name 
 +  test 
 +  Enter number of nodes on which to run job 
 +   
 +  Enter total walltime (hour:minute) 
 +   
 +  Enter email address 
 +  testing@gmail.com 
 +  Generated pbs file for test 
 +  Do you wish to submit job to cluster (y/n) 
 +  y
/app/dokuwiki/data/attic/howto/dlpoly.1449659700.txt.gz · Last modified: 2021/12/09 16:42 (external edit)